scBasset

Train and explore deep convolutional neural networks to embed single cell ATAC-seq profiles.

Basenji

Train and explore deep convolutional neural networks to sequentially predict DNA sequence continuous annotations.

Basset

Train and explore deep convolutional neural networks to predict DNA sequence peak annotations.

Glimmer-MG

Predict genes in metagenomic sequences augmented by classification and clustering.

Quake

Detect and correct sequencing errors in whole-genome shotgun reads.

Scimm

Cluster metagenomic sequences using interpolated Markov models.